Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC015910.1-201ENST00000579400 975 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 AC006538.3-201ENST00000612495 578 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 AL590560.3-201ENST00000623350 461 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PRAMEP78395 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEP78395 AC091951.1-201ENST00000512854 2465 ntBASIC15.62■□□□□ 0.09
PRAMEP78395 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEP78395 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEP78395 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEP78395 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.62■□□□□ 0.09
PRAMEP78395 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEP78395 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEP78395 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.62■□□□□ 0.09
PRAMEP78395 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEP78395 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEP78395 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEP78395 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEP78395 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEP78395 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEP78395 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEP78395 AL844908.2-201ENST00000609461 460 ntBASIC15.61■□□□□ 0.09
PRAMEP78395 GPALPP1-207ENST00000611650 899 ntBASIC15.61■□□□□ 0.09
PRAMEP78395 AL390754.1-201ENST00000619088 582 ntBASIC15.61■□□□□ 0.09
PRAMEP78395 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEP78395 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEP78395 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms