Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 KRT8P49-201ENST00000604166 1432 ntBASIC13.42□□□□□ -0.26
UBA52P62987 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.42□□□□□ -0.26
UBA52P62987 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 GK-202ENST00000378941 458 ntTSL 3 BASIC13.42□□□□□ -0.26
UBA52P62987 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.42□□□□□ -0.26
UBA52P62987 GAPDHP21-201ENST00000450301 1010 ntBASIC13.42□□□□□ -0.26
UBA52P62987 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.42□□□□□ -0.26
UBA52P62987 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.42□□□□□ -0.26
UBA52P62987 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 AP000842.3-202ENST00000569238 1080 ntBASIC13.42□□□□□ -0.26
UBA52P62987 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 AC027307.2-201ENST00000591252 911 ntBASIC13.42□□□□□ -0.26
UBA52P62987 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 AL031055.1-201ENST00000606362 631 ntBASIC13.42□□□□□ -0.26
UBA52P62987 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.42□□□□□ -0.26
UBA52P62987 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
UBA52P62987 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 AC091951.1-201ENST00000512854 2465 ntBASIC13.42□□□□□ -0.26
UBA52P62987 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 AC117489.1-201ENST00000625169 3217 ntBASIC13.42□□□□□ -0.26
UBA52P62987 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
UBA52P62987 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.42□□□□□ -0.26
UBA52P62987 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBA52P62987 LINC01144-201ENST00000626198 1710 ntBASIC13.42□□□□□ -0.26
UBA52P62987 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 FGD5P1-202ENST00000614866 2498 ntBASIC13.41□□□□□ -0.26
UBA52P62987 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 AGAP7P-201ENST00000582299 2062 ntBASIC13.41□□□□□ -0.26
UBA52P62987 AGAP14-201ENST00000624701 2060 ntBASIC13.41□□□□□ -0.26
UBA52P62987 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
UBA52P62987 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.41□□□□□ -0.26
UBA52P62987 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.41□□□□□ -0.26
UBA52P62987 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.41□□□□□ -0.26
UBA52P62987 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms