Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VBP1P61758 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 AL691432.1-201ENST00000596308 1422 ntBASIC13.89□□□□□ -0.19
VBP1P61758 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.88□□□□□ -0.19
VBP1P61758 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.88□□□□□ -0.19
VBP1P61758 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VBP1P61758 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VBP1P61758 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.88□□□□□ -0.19
VBP1P61758 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.88□□□□□ -0.19
VBP1P61758 AL023775.1-201ENST00000454907 1746 ntBASIC13.88□□□□□ -0.19
VBP1P61758 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.88□□□□□ -0.19
VBP1P61758 HMGA1P7-201ENST00000406908 502 ntBASIC13.88□□□□□ -0.19
VBP1P61758 KRT18P57-201ENST00000443599 1254 ntBASIC13.88□□□□□ -0.19
VBP1P61758 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.88□□□□□ -0.19
VBP1P61758 AC132008.2-207ENST00000454517 770 ntBASIC13.88□□□□□ -0.19
VBP1P61758 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.88□□□□□ -0.19
VBP1P61758 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.88□□□□□ -0.19
VBP1P61758 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 AC092329.2-201ENST00000598402 547 ntBASIC13.88□□□□□ -0.19
VBP1P61758 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.88□□□□□ -0.19
VBP1P61758 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.88□□□□□ -0.19
VBP1P61758 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VBP1P61758 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.88□□□□□ -0.19
VBP1P61758 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.88□□□□□ -0.19
VBP1P61758 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VBP1P61758 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VBP1P61758 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 AC073439.1-201ENST00000624121 1774 ntBASIC13.87□□□□□ -0.19
VBP1P61758 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.87□□□□□ -0.19
VBP1P61758 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 AC069148.1-201ENST00000608741 768 ntBASIC13.87□□□□□ -0.19
VBP1P61758 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VBP1P61758 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms