Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RPS3AP61247 AL592424.1-201ENST00000563624 1536 ntBASIC14.57□□□□□ -0.08
RPS3AP61247 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RPS3AP61247 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
RPS3AP61247 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RPS3AP61247 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 BASP1P1-201ENST00000430708 665 ntBASIC14.57□□□□□ -0.08
RPS3AP61247 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 MTND6P24-201ENST00000440466 518 ntBASIC14.57□□□□□ -0.08
RPS3AP61247 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.57□□□□□ -0.08
RPS3AP61247 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.57□□□□□ -0.08
RPS3AP61247 AC061975.2-201ENST00000581722 295 ntBASIC14.57□□□□□ -0.08
RPS3AP61247 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.57□□□□□ -0.08
RPS3AP61247 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS3AP61247 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS3AP61247 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RPS3AP61247 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.56□□□□□ -0.08
RPS3AP61247 CETN4P-206ENST00000642099 2168 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 AC013726.1-201ENST00000563747 2285 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.56□□□□□ -0.08
RPS3AP61247 AL139010.1-201ENST00000454878 894 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 AC093214.1-201ENST00000511688 1107 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 RNA5SP421-201ENST00000516864 134 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 DUX4L27-201ENST00000554796 1261 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.56□□□□□ -0.08
RPS3AP61247 AC105021.1-202ENST00000570572 669 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.56□□□□□ -0.08
RPS3AP61247 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 AC073592.8-201ENST00000624126 511 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 CICP17-201ENST00000418553 2377 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 REXO1L1P-202ENST00000608646 1974 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RPS3AP61247 AC097376.2-205ENST00000610159 5334 ntBASIC14.56□□□□□ -0.08
RPS3AP61247 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RPS3AP61247 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPS3AP61247 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.55□□□□□ -0.08
RPS3AP61247 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.55□□□□□ -0.08
RPS3AP61247 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPS3AP61247 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
RPS3AP61247 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPS3AP61247 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms