Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SPCS3P61009 AC142381.1-201ENST00000426099 345 ntBASIC12.65□□□□□ -0.38
SPCS3P61009 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 KRT18P2-201ENST00000447938 1258 ntBASIC12.65□□□□□ -0.38
SPCS3P61009 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 FAM86C2P-203ENST00000528684 1004 ntBASIC12.65□□□□□ -0.38
SPCS3P61009 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.65□□□□□ -0.38
SPCS3P61009 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 WASH3P-207ENST00000560956 1394 ntBASIC12.65□□□□□ -0.38
SPCS3P61009 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 FO538757.1-201ENST00000623083 1397 ntBASIC12.65□□□□□ -0.38
SPCS3P61009 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SPCS3P61009 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS3P61009 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SPCS3P61009 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SPCS3P61009 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SPCS3P61009 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.39
SPCS3P61009 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SPCS3P61009 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SPCS3P61009 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 AC104109.2-201ENST00000602919 1418 ntBASIC12.64□□□□□ -0.39
SPCS3P61009 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.64□□□□□ -0.39
SPCS3P61009 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 AL671277.1-201ENST00000429656 993 ntBASIC12.64□□□□□ -0.39
SPCS3P61009 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.64□□□□□ -0.39
SPCS3P61009 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.64□□□□□ -0.39
SPCS3P61009 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.64□□□□□ -0.39
SPCS3P61009 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.64□□□□□ -0.39
SPCS3P61009 AC034105.1-201ENST00000563488 319 ntBASIC12.64□□□□□ -0.39
SPCS3P61009 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.64□□□□□ -0.39
SPCS3P61009 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.64□□□□□ -0.39
SPCS3P61009 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 TCAF1P1-201ENST00000414990 2232 ntBASIC12.64□□□□□ -0.39
SPCS3P61009 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS3P61009 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
SPCS3P61009 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS3P61009 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS3P61009 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms