Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 CYP2T1P-202ENST00000641596 2535 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 AL162727.3-201ENST00000635661 2787 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CLDN6P56747 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CLDN6P56747 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 RN7SL11P-201ENST00000471305 293 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.75□□□□□ -0.05
CLDN6P56747 PPY2P-201ENST00000582808 702 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
CLDN6P56747 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CLDN6P56747 CU633904.3-201ENST00000624042 1029 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 AC063926.3-201ENST00000624734 5658 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 LRRC59-203ENST00000576448 1531 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 LINC02199-201ENST00000506655 2702 ntBASIC14.75□□□□□ -0.05
CLDN6P56747 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN6P56747 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CLDN6P56747 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN6P56747 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLDN6P56747 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CLDN6P56747 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 FLJ16779-201ENST00000612722 7638 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
CLDN6P56747 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLDN6P56747 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN6P56747 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CLDN6P56747 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 AC104457.1-201ENST00000401024 814 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLDN6P56747 CD8B2-202ENST00000417670 633 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.74□□□□□ -0.05
CLDN6P56747 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 RN7SL720P-201ENST00000488178 304 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 COX5BP1-201ENST00000507622 393 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 AC134698.3-201ENST00000523880 214 ntBASIC14.74□□□□□ -0.05
CLDN6P56747 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN6P56747 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms