Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PDE1AP54750 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDE1AP54750 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE1AP54750 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE1AP54750 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE1AP54750 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDE1AP54750 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDE1AP54750 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE1AP54750 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE1AP54750 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE1AP54750 INTS4P2-202ENST00000614726 2019 ntBASIC18.78■□□□□ 0.6
PDE1AP54750 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
PDE1AP54750 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.77■□□□□ 0.6
PDE1AP54750 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDE1AP54750 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PDE1AP54750 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 HLA-K-203ENST00000430151 1046 ntBASIC18.77■□□□□ 0.6
PDE1AP54750 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 AC092552.1-201ENST00000547243 906 ntBASIC18.77■□□□□ 0.6
PDE1AP54750 AC123567.1-201ENST00000548294 1261 ntBASIC18.77■□□□□ 0.6
PDE1AP54750 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
PDE1AP54750 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.77■□□□□ 0.6
PDE1AP54750 AC120045.2-201ENST00000567334 178 ntBASIC18.77■□□□□ 0.6
PDE1AP54750 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.77■□□□□ 0.6
PDE1AP54750 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.77■□□□□ 0.6
PDE1AP54750 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.77■□□□□ 0.6
PDE1AP54750 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.77■□□□□ 0.6
PDE1AP54750 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDE1AP54750 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE1AP54750 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE1AP54750 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE1AP54750 LILRP1-201ENST00000444199 1370 ntBASIC18.77■□□□□ 0.6
PDE1AP54750 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDE1AP54750 AL158070.2-201ENST00000623713 1621 ntBASIC18.77■□□□□ 0.6
PDE1AP54750 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PDE1AP54750 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE1AP54750 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE1AP54750 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PDE1AP54750 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE1AP54750 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.77■□□□□ 0.59
PDE1AP54750 REXO1L5P-201ENST00000622260 2098 ntBASIC18.77■□□□□ 0.59
PDE1AP54750 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PDE1AP54750 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 AL442647.2-201ENST00000429864 857 ntBASIC18.76■□□□□ 0.59
PDE1AP54750 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE1AP54750 RPL13AP25-201ENST00000484130 612 ntBASIC18.76■□□□□ 0.59
PDE1AP54750 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 AC124283.3-201ENST00000570869 594 ntBASIC18.76■□□□□ 0.59
PDE1AP54750 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.76■□□□□ 0.59
PDE1AP54750 AC093813.1-201ENST00000605066 256 ntBASIC18.76■□□□□ 0.59
PDE1AP54750 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE1AP54750 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 AL391825.1-201ENST00000457671 1364 ntBASIC18.76■□□□□ 0.59
PDE1AP54750 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PDE1AP54750 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE1AP54750 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE1AP54750 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE1AP54750 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE1AP54750 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDE1AP54750 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDE1AP54750 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms