Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.46□□□□□ -0.25
ATP1B3P54709 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 RN7SL828P-201ENST00000607615 303 ntBASIC13.46□□□□□ -0.25
ATP1B3P54709 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.46□□□□□ -0.25
ATP1B3P54709 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATP1B3P54709 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATP1B3P54709 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.46□□□□□ -0.26
ATP1B3P54709 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATP1B3P54709 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
ATP1B3P54709 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.46□□□□□ -0.26
ATP1B3P54709 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATP1B3P54709 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATP1B3P54709 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATP1B3P54709 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATP1B3P54709 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
ATP1B3P54709 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ATP1B3P54709 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 AC117489.1-201ENST00000625169 3217 ntBASIC13.45□□□□□ -0.26
ATP1B3P54709 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 MTND6P24-201ENST00000440466 518 ntBASIC13.45□□□□□ -0.26
ATP1B3P54709 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.45□□□□□ -0.26
ATP1B3P54709 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 BANF1P1-201ENST00000553684 263 ntBASIC13.45□□□□□ -0.26
ATP1B3P54709 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.45□□□□□ -0.26
ATP1B3P54709 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.45□□□□□ -0.26
ATP1B3P54709 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.45□□□□□ -0.26
ATP1B3P54709 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 AC007967.4-201ENST00000614700 386 ntBASIC13.45□□□□□ -0.26
ATP1B3P54709 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.45□□□□□ -0.26
ATP1B3P54709 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATP1B3P54709 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.45□□□□□ -0.26
ATP1B3P54709 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATP1B3P54709 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.44□□□□□ -0.26
ATP1B3P54709 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 AGAP7P-201ENST00000582299 2062 ntBASIC13.44□□□□□ -0.26
ATP1B3P54709 AGAP14-201ENST00000624701 2060 ntBASIC13.44□□□□□ -0.26
ATP1B3P54709 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ATP1B3P54709 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.44□□□□□ -0.26
ATP1B3P54709 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.44□□□□□ -0.26
ATP1B3P54709 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.44□□□□□ -0.26
ATP1B3P54709 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ATP1B3P54709 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms