Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.64□□□□□ -0.23
CCR9P51686 AC040169.1-201ENST00000565382 521 ntBASIC13.64□□□□□ -0.23
CCR9P51686 C20orf181-201ENST00000623918 480 ntBASIC13.64□□□□□ -0.23
CCR9P51686 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 CICP11-201ENST00000434745 2827 ntBASIC13.64□□□□□ -0.23
CCR9P51686 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CCR9P51686 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 BEND3P1-201ENST00000421591 1944 ntBASIC13.64□□□□□ -0.23
CCR9P51686 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCR9P51686 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCR9P51686 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 AC023274.1-201ENST00000418278 595 ntBASIC13.63□□□□□ -0.23
CCR9P51686 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.63□□□□□ -0.23
CCR9P51686 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.63□□□□□ -0.23
CCR9P51686 SLC25A1P1-201ENST00000528351 927 ntBASIC13.63□□□□□ -0.23
CCR9P51686 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCR9P51686 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.63□□□□□ -0.23
CCR9P51686 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CCR9P51686 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCR9P51686 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCR9P51686 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
CCR9P51686 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCR9P51686 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.62□□□□□ -0.23
CCR9P51686 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCR9P51686 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCR9P51686 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CCR9P51686 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.62□□□□□ -0.23
CCR9P51686 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.62□□□□□ -0.23
CCR9P51686 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCR9P51686 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCR9P51686 BANF1P1-201ENST00000553684 263 ntBASIC13.62□□□□□ -0.23
CCR9P51686 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.62□□□□□ -0.23
CCR9P51686 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.62□□□□□ -0.23
CCR9P51686 AC018529.1-201ENST00000613063 361 ntBASIC13.62□□□□□ -0.23
CCR9P51686 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.62□□□□□ -0.23
CCR9P51686 AL645728.2-202ENST00000641679 227 ntBASIC13.62□□□□□ -0.23
CCR9P51686 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CCR9P51686 AC067750.1-201ENST00000608826 6545 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms