Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.66■□□□□ 0.1
HADHAP40939 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.66■□□□□ 0.1
HADHAP40939 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.66■□□□□ 0.1
HADHAP40939 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HADHAP40939 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 AC092337.1-201ENST00000568699 1129 ntBASIC15.66■□□□□ 0.1
HADHAP40939 AC005498.2-205ENST00000593218 784 ntBASIC15.66■□□□□ 0.1
HADHAP40939 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 AF228730.6-201ENST00000641497 218 ntBASIC15.66■□□□□ 0.1
HADHAP40939 AC084121.3-201ENST00000641716 218 ntBASIC15.66■□□□□ 0.1
HADHAP40939 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 ZBED1P1-201ENST00000502364 1930 ntBASIC15.66■□□□□ 0.1
HADHAP40939 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 AC138969.3-201ENST00000546612 1459 ntBASIC15.65■□□□□ 0.1
HADHAP40939 AC138932.2-201ENST00000548268 1459 ntBASIC15.65■□□□□ 0.1
HADHAP40939 AC126755.4-201ENST00000549796 1459 ntBASIC15.65■□□□□ 0.1
HADHAP40939 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
HADHAP40939 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HADHAP40939 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.65■□□□□ 0.1
HADHAP40939 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HADHAP40939 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HADHAP40939 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.65■□□□□ 0.1
HADHAP40939 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 AC009407.1-201ENST00000568958 598 ntBASIC15.65■□□□□ 0.1
HADHAP40939 AC015910.1-201ENST00000579400 975 ntBASIC15.65■□□□□ 0.1
HADHAP40939 AC004461.2-201ENST00000629517 803 ntBASIC15.65■□□□□ 0.1
HADHAP40939 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HADHAP40939 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.65■□□□□ 0.1
HADHAP40939 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.65■□□□□ 0.1
HADHAP40939 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HADHAP40939 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HADHAP40939 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
HADHAP40939 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HADHAP40939 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.64■□□□□ 0.09
HADHAP40939 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.64■□□□□ 0.09
HADHAP40939 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.64■□□□□ 0.09
HADHAP40939 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.64■□□□□ 0.09
HADHAP40939 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
HADHAP40939 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.64■□□□□ 0.09
HADHAP40939 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.64■□□□□ 0.09
HADHAP40939 KRT18P64-201ENST00000434946 1219 ntBASIC15.64■□□□□ 0.09
HADHAP40939 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.64■□□□□ 0.09
HADHAP40939 KRT18P43-201ENST00000469825 1281 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms