Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.9■□□□□ 0.3
USP8P40818 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 FAM86GP-201ENST00000448322 971 ntBASIC16.9■□□□□ 0.3
USP8P40818 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.9■□□□□ 0.3
USP8P40818 AC069120.2-201ENST00000524091 540 ntBASIC16.9■□□□□ 0.3
USP8P40818 AC027369.6-201ENST00000525520 931 ntBASIC16.9■□□□□ 0.3
USP8P40818 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.9■□□□□ 0.3
USP8P40818 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.9■□□□□ 0.3
USP8P40818 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 AL033527.5-202ENST00000641632 1098 ntBASIC16.9■□□□□ 0.3
USP8P40818 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
USP8P40818 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USP8P40818 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
USP8P40818 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.89■□□□□ 0.3
USP8P40818 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
USP8P40818 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.89■□□□□ 0.29
USP8P40818 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.89■□□□□ 0.29
USP8P40818 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.89■□□□□ 0.29
USP8P40818 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.89■□□□□ 0.29
USP8P40818 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.89■□□□□ 0.29
USP8P40818 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 AC073592.8-201ENST00000624126 511 ntBASIC16.89■□□□□ 0.29
USP8P40818 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 AC112693.3-201ENST00000624819 1983 ntBASIC16.89■□□□□ 0.29
USP8P40818 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP8P40818 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP8P40818 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.89■□□□□ 0.29
USP8P40818 AC067750.1-201ENST00000608826 6545 ntBASIC16.88■□□□□ 0.29
USP8P40818 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
USP8P40818 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.88■□□□□ 0.29
USP8P40818 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.88■□□□□ 0.29
USP8P40818 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.88■□□□□ 0.29
USP8P40818 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.88■□□□□ 0.29
USP8P40818 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
USP8P40818 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.88■□□□□ 0.29
USP8P40818 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP8P40818 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.88■□□□□ 0.29
USP8P40818 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms