Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.4■□□□□ 0.86
USP6P35125 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6P35125 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC20.4■□□□□ 0.86
USP6P35125 FTLP1-201ENST00000449155 526 ntBASIC20.4■□□□□ 0.86
USP6P35125 MPRIPP1-201ENST00000452433 1089 ntBASIC20.4■□□□□ 0.86
USP6P35125 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.4■□□□□ 0.86
USP6P35125 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.4■□□□□ 0.86
USP6P35125 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6P35125 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6P35125 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.4■□□□□ 0.86
USP6P35125 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6P35125 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.4■□□□□ 0.86
USP6P35125 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
USP6P35125 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6P35125 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC20.4■□□□□ 0.86
USP6P35125 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6P35125 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.4■□□□□ 0.86
USP6P35125 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.4■□□□□ 0.86
USP6P35125 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
USP6P35125 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP6P35125 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.39■□□□□ 0.86
USP6P35125 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
USP6P35125 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
USP6P35125 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 RN7SKP214-201ENST00000364208 315 ntBASIC20.39■□□□□ 0.85
USP6P35125 TLE1P1-201ENST00000422965 589 ntBASIC20.39■□□□□ 0.85
USP6P35125 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC20.39■□□□□ 0.85
USP6P35125 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6P35125 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.39■□□□□ 0.85
USP6P35125 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 AC242376.1-201ENST00000559033 726 ntBASIC20.39■□□□□ 0.85
USP6P35125 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.39■□□□□ 0.85
USP6P35125 AC008825.2-201ENST00000603374 718 ntBASIC20.39■□□□□ 0.85
USP6P35125 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6P35125 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6P35125 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
USP6P35125 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6P35125 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6P35125 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6P35125 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6P35125 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 AC023090.2-201ENST00000625182 2110 ntBASIC20.38■□□□□ 0.85
USP6P35125 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP6P35125 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.38■□□□□ 0.85
USP6P35125 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
USP6P35125 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
USP6P35125 AC006335.1-201ENST00000445200 547 ntBASIC20.38■□□□□ 0.85
USP6P35125 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.38■□□□□ 0.85
USP6P35125 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
USP6P35125 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP6P35125 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.38■□□□□ 0.85
USP6P35125 AC005962.1-201ENST00000584100 773 ntBASIC20.38■□□□□ 0.85
USP6P35125 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.38■□□□□ 0.85
USP6P35125 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USP6P35125 AC084018.2-201ENST00000613093 2607 ntBASIC20.38■□□□□ 0.85
USP6P35125 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.38■□□□□ 0.85
USP6P35125 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms