Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.2□□□□□ -0.14
SHC1P29353 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 AL365209.1-201ENST00000624418 6473 ntBASIC14.19□□□□□ -0.14
SHC1P29353 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.19□□□□□ -0.14
SHC1P29353 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 SPTLC1P1-201ENST00000447199 261 ntBASIC14.19□□□□□ -0.14
SHC1P29353 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.19□□□□□ -0.14
SHC1P29353 SLED1-202ENST00000512051 380 ntBASIC14.19□□□□□ -0.14
SHC1P29353 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.19□□□□□ -0.14
SHC1P29353 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.19□□□□□ -0.14
SHC1P29353 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.19□□□□□ -0.14
SHC1P29353 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.19□□□□□ -0.14
SHC1P29353 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 C18orf15-201ENST00000623680 2534 ntBASIC14.19□□□□□ -0.14
SHC1P29353 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.19□□□□□ -0.14
SHC1P29353 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.19□□□□□ -0.14
SHC1P29353 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 PCDHA3-202ENST00000532566 4594 ntBASIC14.19□□□□□ -0.14
SHC1P29353 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHC1P29353 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHC1P29353 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.18□□□□□ -0.14
SHC1P29353 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 AC005089.1-201ENST00000619486 2241 ntBASIC14.18□□□□□ -0.14
SHC1P29353 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHC1P29353 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 SPDYE19P-201ENST00000338590 713 ntBASIC14.18□□□□□ -0.14
SHC1P29353 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHC1P29353 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.18□□□□□ -0.14
SHC1P29353 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SHC1P29353 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.18□□□□□ -0.14
SHC1P29353 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 AC092337.1-201ENST00000568699 1129 ntBASIC14.18□□□□□ -0.14
SHC1P29353 AC008761.3-201ENST00000624803 892 ntBASIC14.18□□□□□ -0.14
SHC1P29353 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms