Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TNFSF4P23510 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFSF4P23510 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AC098614.1-201ENST00000368528 745 ntBASIC13.24□□□□□ -0.29
TNFSF4P23510 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AP006294.1-201ENST00000415407 339 ntBASIC13.24□□□□□ -0.29
TNFSF4P23510 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AC011495.1-201ENST00000498085 584 ntBASIC13.24□□□□□ -0.29
TNFSF4P23510 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.24□□□□□ -0.29
TNFSF4P23510 API5-211ENST00000534695 560 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AC133539.2-201ENST00000604757 467 ntBASIC13.24□□□□□ -0.29
TNFSF4P23510 AC008494.3-201ENST00000606615 944 ntBASIC13.24□□□□□ -0.29
TNFSF4P23510 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFSF4P23510 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFSF4P23510 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
TNFSF4P23510 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TNFSF4P23510 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFSF4P23510 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 AC087481.3-201ENST00000602886 1894 ntBASIC13.23□□□□□ -0.29
TNFSF4P23510 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
TNFSF4P23510 AC134915.1-201ENST00000426461 574 ntBASIC13.23□□□□□ -0.29
TNFSF4P23510 AL442647.2-201ENST00000429864 857 ntBASIC13.23□□□□□ -0.29
TNFSF4P23510 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.23□□□□□ -0.29
TNFSF4P23510 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
TNFSF4P23510 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TNFSF4P23510 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TNFSF4P23510 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SPDYE22P-201ENST00000582158 798 ntBASIC13.23□□□□□ -0.29
TNFSF4P23510 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.23□□□□□ -0.29
TNFSF4P23510 AL049840.4-201ENST00000602422 811 ntBASIC13.23□□□□□ -0.29
TNFSF4P23510 TMEM261P1-201ENST00000604899 340 ntBASIC13.23□□□□□ -0.29
TNFSF4P23510 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms