Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCLP19338 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.49■□□□□ 0.55
NCLP19338 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.49■□□□□ 0.55
NCLP19338 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.49■□□□□ 0.55
NCLP19338 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCLP19338 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.49■□□□□ 0.55
NCLP19338 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NCLP19338 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC18.49■□□□□ 0.55
NCLP19338 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.49■□□□□ 0.55
NCLP19338 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.49■□□□□ 0.55
NCLP19338 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 WASH6P-202ENST00000359512 1437 ntBASIC18.49■□□□□ 0.55
NCLP19338 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLP19338 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLP19338 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NCLP19338 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
NCLP19338 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.48■□□□□ 0.55
NCLP19338 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.48■□□□□ 0.55
NCLP19338 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
NCLP19338 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 AC005912.2-201ENST00000619492 2400 ntBASIC18.48■□□□□ 0.55
NCLP19338 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCLP19338 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLP19338 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.48■□□□□ 0.55
NCLP19338 KRT18P28-201ENST00000453838 1332 ntBASIC18.48■□□□□ 0.55
NCLP19338 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NCLP19338 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 AL359183.1-201ENST00000623796 2132 ntBASIC18.47■□□□□ 0.55
NCLP19338 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NCLP19338 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.47■□□□□ 0.55
NCLP19338 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.47■□□□□ 0.55
NCLP19338 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NCLP19338 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.47■□□□□ 0.55
NCLP19338 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NCLP19338 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 GRK6P1-201ENST00000400595 1711 ntBASIC18.47■□□□□ 0.55
NCLP19338 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
NCLP19338 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.47■□□□□ 0.55
NCLP19338 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLP19338 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NCLP19338 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NCLP19338 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC18.47■□□□□ 0.55
NCLP19338 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NCLP19338 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
NCLP19338 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms