Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.97■□□□□ 0.31
GAP43P17677 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.97■□□□□ 0.31
GAP43P17677 SPDYE22P-201ENST00000582158 798 ntBASIC16.97■□□□□ 0.31
GAP43P17677 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.97■□□□□ 0.31
GAP43P17677 BX539320.1-201ENST00000623759 877 ntBASIC16.97■□□□□ 0.31
GAP43P17677 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.97■□□□□ 0.31
GAP43P17677 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GAP43P17677 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GAP43P17677 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 AL360270.3-201ENST00000609118 1348 ntBASIC16.96■□□□□ 0.31
GAP43P17677 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GAP43P17677 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.96■□□□□ 0.31
GAP43P17677 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.96■□□□□ 0.31
GAP43P17677 FLJ16779-201ENST00000612722 7638 ntBASIC16.96■□□□□ 0.31
GAP43P17677 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.96■□□□□ 0.31
GAP43P17677 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.96■□□□□ 0.31
GAP43P17677 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 ENPP7P5-201ENST00000541031 1031 ntBASIC16.96■□□□□ 0.31
GAP43P17677 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.96■□□□□ 0.31
GAP43P17677 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.96■□□□□ 0.31
GAP43P17677 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.96■□□□□ 0.31
GAP43P17677 CTBP2P3-201ENST00000585629 1255 ntBASIC16.96■□□□□ 0.31
GAP43P17677 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
GAP43P17677 REXO1L2P-201ENST00000425429 2069 ntBASIC16.96■□□□□ 0.31
GAP43P17677 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.96■□□□□ 0.31
GAP43P17677 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.96■□□□□ 0.31
GAP43P17677 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GAP43P17677 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
GAP43P17677 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
GAP43P17677 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GAP43P17677 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
GAP43P17677 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
GAP43P17677 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GAP43P17677 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
GAP43P17677 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GAP43P17677 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.95■□□□□ 0.3
GAP43P17677 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.95■□□□□ 0.3
GAP43P17677 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.95■□□□□ 0.3
GAP43P17677 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.95■□□□□ 0.3
GAP43P17677 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.95■□□□□ 0.3
GAP43P17677 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.95■□□□□ 0.3
GAP43P17677 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.95■□□□□ 0.3
GAP43P17677 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.95■□□□□ 0.3
GAP43P17677 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.95■□□□□ 0.3
GAP43P17677 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.95■□□□□ 0.3
GAP43P17677 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.95■□□□□ 0.3
GAP43P17677 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.95■□□□□ 0.3
GAP43P17677 PRSS30P-206ENST00000641773 873 ntBASIC16.95■□□□□ 0.3
GAP43P17677 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GAP43P17677 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GAP43P17677 AL158070.2-201ENST00000623713 1621 ntBASIC16.95■□□□□ 0.3
GAP43P17677 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms