Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMP1P11279 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMP1P11279 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LAMP1P11279 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMP1P11279 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.64□□□□□ -0.07
LAMP1P11279 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.64□□□□□ -0.07
LAMP1P11279 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMP1P11279 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMP1P11279 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMP1P11279 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LAMP1P11279 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMP1P11279 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 REXO1L4P-201ENST00000605109 1937 ntBASIC14.64□□□□□ -0.07
LAMP1P11279 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LAMP1P11279 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMP1P11279 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LAMP1P11279 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LAMP1P11279 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 AC138969.3-201ENST00000546612 1459 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 AC138932.2-201ENST00000548268 1459 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 AC126755.4-201ENST00000549796 1459 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMP1P11279 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 MIR1233-2-201ENST00000408138 82 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 MIR1233-1-201ENST00000408722 82 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMP1P11279 AC107890.1-201ENST00000422478 521 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 AC092580.3-201ENST00000430932 139 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LAMP1P11279 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LAMP1P11279 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMP1P11279 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMP1P11279 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LAMP1P11279 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMP1P11279 AC140878.1-201ENST00000565277 250 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.63□□□□□ -0.07
LAMP1P11279 AC015911.4-201ENST00000588022 1070 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
LAMP1P11279 AL691403.2-201ENST00000618460 490 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LAMP1P11279 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LAMP1P11279 AC026748.1-201ENST00000624349 3251 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 AC087499.5-201ENST00000452760 1342 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LAMP1P11279 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMP1P11279 AC012508.2-201ENST00000567613 1472 ntBASIC14.63□□□□□ -0.07
LAMP1P11279 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.63□□□□□ -0.07
LAMP1P11279 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.63□□□□□ -0.07
LAMP1P11279 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
LAMP1P11279 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LAMP1P11279 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LAMP1P11279 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
LAMP1P11279 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LAMP1P11279 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LAMP1P11279 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LAMP1P11279 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LAMP1P11279 AC104457.1-201ENST00000401024 814 ntBASIC14.62□□□□□ -0.07
LAMP1P11279 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LAMP1P11279 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.62□□□□□ -0.07
LAMP1P11279 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.62□□□□□ -0.07
LAMP1P11279 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms