Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 AL078644.1-201ENST00000609881 752 ntBASIC11.59□□□□□ -0.55
SMIM17P0DL12 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 AL589702.1-201ENST00000641229 1509 ntBASIC11.59□□□□□ -0.55
SMIM17P0DL12 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM17P0DL12 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM17P0DL12 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SMIM17P0DL12 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
SMIM17P0DL12 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
SMIM17P0DL12 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 AF238378.1-201ENST00000526806 358 ntBASIC11.58□□□□□ -0.56
SMIM17P0DL12 AC109635.5-201ENST00000533593 962 ntBASIC11.58□□□□□ -0.56
SMIM17P0DL12 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.58□□□□□ -0.56
SMIM17P0DL12 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMIM17P0DL12 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 AC073439.1-201ENST00000624121 1774 ntBASIC11.57□□□□□ -0.56
SMIM17P0DL12 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 AGAP7P-201ENST00000582299 2062 ntBASIC11.57□□□□□ -0.56
SMIM17P0DL12 AGAP14-201ENST00000624701 2060 ntBASIC11.57□□□□□ -0.56
SMIM17P0DL12 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMIM17P0DL12 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.57□□□□□ -0.56
SMIM17P0DL12 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms