Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HLA-K-203ENST00000430151 1046 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC6P09630 AC253536.4-201ENST00000440539 267 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC6P09630 TUBB8P8-201ENST00000458717 1058 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC6P09630 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC6P09630 AC005324.6-201ENST00000587972 613 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC6P09630 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC6P09630 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC6P09630 AC004923.1-202ENST00000642106 209 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC6P09630 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC6P09630 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC6P09630 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 AC055811.4-201ENST00000624039 1754 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
HOXC6P09630 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC6P09630 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC6P09630 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC6P09630 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 FTLP1-201ENST00000449155 526 ntBASIC17.22■□□□□ 0.35
HOXC6P09630 AC106794.1-201ENST00000506935 792 ntBASIC17.22■□□□□ 0.35
HOXC6P09630 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC6P09630 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC6P09630 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC6P09630 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 RN7SL163P-201ENST00000583100 276 ntBASIC17.22■□□□□ 0.35
HOXC6P09630 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC6P09630 AC004466.1-201ENST00000599515 1080 ntBASIC17.22■□□□□ 0.35
HOXC6P09630 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HOXC6P09630 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC6P09630 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC6P09630 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC6P09630 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC6P09630 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXC6P09630 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HOXC6P09630 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC6P09630 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.21■□□□□ 0.35
HOXC6P09630 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HOXC6P09630 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC6P09630 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 RPL5P21-201ENST00000404620 815 ntBASIC17.21■□□□□ 0.35
HOXC6P09630 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC6P09630 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC6P09630 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC6P09630 NUP210P1-202ENST00000504322 710 ntBASIC17.21■□□□□ 0.35
HOXC6P09630 MARK2P5-201ENST00000507649 634 ntBASIC17.21■□□□□ 0.35
HOXC6P09630 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC6P09630 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
HOXC6P09630 AL162426.1-201ENST00000624141 743 ntBASIC17.21■□□□□ 0.35
HOXC6P09630 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HOXC6P09630 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC6P09630 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HOXC6P09630 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC6P09630 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms