Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.25□□□□□ -0.45
CSN3P07498 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CSN3P07498 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
CSN3P07498 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.25□□□□□ -0.45
CSN3P07498 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSN3P07498 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
CSN3P07498 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.24□□□□□ -0.45
CSN3P07498 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.24□□□□□ -0.45
CSN3P07498 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.24□□□□□ -0.45
CSN3P07498 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 SPDYE17-201ENST00000412399 783 ntBASIC12.24□□□□□ -0.45
CSN3P07498 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.24□□□□□ -0.45
CSN3P07498 AL512638.1-201ENST00000457493 794 ntBASIC12.24□□□□□ -0.45
CSN3P07498 INGX-202ENST00000489074 768 ntBASIC12.24□□□□□ -0.45
CSN3P07498 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.24□□□□□ -0.45
CSN3P07498 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.24□□□□□ -0.45
CSN3P07498 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.24□□□□□ -0.45
CSN3P07498 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.24□□□□□ -0.45
CSN3P07498 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 TEX28P1-201ENST00000613479 1221 ntBASIC12.24□□□□□ -0.45
CSN3P07498 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 TEX28P2-201ENST00000617764 1221 ntBASIC12.24□□□□□ -0.45
CSN3P07498 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.24□□□□□ -0.45
CSN3P07498 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.24□□□□□ -0.45
CSN3P07498 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.24□□□□□ -0.45
CSN3P07498 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSN3P07498 AC023908.3-201ENST00000564211 3047 ntBASIC12.24□□□□□ -0.45
CSN3P07498 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CSN3P07498 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.24□□□□□ -0.45
CSN3P07498 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 AL136982.4-201ENST00000437689 1740 ntBASIC12.23□□□□□ -0.45
CSN3P07498 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSN3P07498 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 AL691432.1-201ENST00000596308 1422 ntBASIC12.23□□□□□ -0.45
CSN3P07498 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 KRT8P12-202ENST00000472924 1397 ntBASIC12.23□□□□□ -0.45
CSN3P07498 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
CSN3P07498 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.23□□□□□ -0.45
CSN3P07498 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms