Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGN1P05114 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGN1P05114 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGN1P05114 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGN1P05114 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGN1P05114 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGN1P05114 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGN1P05114 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 SPDYE17-201ENST00000412399 783 ntBASIC14.03□□□□□ -0.16
HMGN1P05114 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGN1P05114 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 AC105021.1-202ENST00000570572 669 ntBASIC14.03□□□□□ -0.16
HMGN1P05114 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.03□□□□□ -0.16
HMGN1P05114 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 AC005252.3-201ENST00000623855 2258 ntBASIC14.03□□□□□ -0.16
HMGN1P05114 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HMGN1P05114 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HMGN1P05114 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGN1P05114 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMGN1P05114 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGN1P05114 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMGN1P05114 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGN1P05114 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGN1P05114 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGN1P05114 AC126335.2-201ENST00000623362 4637 ntBASIC14.02□□□□□ -0.16
HMGN1P05114 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGN1P05114 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
HMGN1P05114 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGN1P05114 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGN1P05114 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGN1P05114 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGN1P05114 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HMGN1P05114 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGN1P05114 AL590627.1-203ENST00000421194 1026 ntBASIC14.02□□□□□ -0.17
HMGN1P05114 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGN1P05114 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGN1P05114 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.02□□□□□ -0.17
HMGN1P05114 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGN1P05114 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGN1P05114 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGN1P05114 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGN1P05114 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms