Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL109837.1-201ENST00000603272 613 ntBASIC16.38■□□□□ 0.21
TIMP1P01033 Z98259.2-201ENST00000641583 609 ntBASIC16.38■□□□□ 0.21
TIMP1P01033 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.38■□□□□ 0.21
TIMP1P01033 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TIMP1P01033 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 AL157414.3-201ENST00000624276 1954 ntBASIC16.37■□□□□ 0.21
TIMP1P01033 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TIMP1P01033 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TIMP1P01033 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.37■□□□□ 0.21
TIMP1P01033 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.37■□□□□ 0.21
TIMP1P01033 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.37■□□□□ 0.21
TIMP1P01033 IGHV3-37-201ENST00000518544 340 ntBASIC16.37■□□□□ 0.21
TIMP1P01033 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.37■□□□□ 0.21
TIMP1P01033 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.37■□□□□ 0.21
TIMP1P01033 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.37■□□□□ 0.21
TIMP1P01033 MIR6769A-201ENST00000617340 73 ntBASIC16.37■□□□□ 0.21
TIMP1P01033 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.37■□□□□ 0.21
TIMP1P01033 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.37■□□□□ 0.21
TIMP1P01033 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 AC136759.1-202ENST00000530858 2194 ntBASIC16.37■□□□□ 0.21
TIMP1P01033 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.37■□□□□ 0.21
TIMP1P01033 AC006058.4-201ENST00000624016 1670 ntBASIC16.37■□□□□ 0.21
TIMP1P01033 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TIMP1P01033 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.36■□□□□ 0.21
TIMP1P01033 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.36■□□□□ 0.21
TIMP1P01033 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.36■□□□□ 0.21
TIMP1P01033 MIR3677-201ENST00000578964 60 ntBASIC16.36■□□□□ 0.21
TIMP1P01033 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TIMP1P01033 LINC02447-202ENST00000501888 2146 ntBASIC16.36■□□□□ 0.21
TIMP1P01033 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TIMP1P01033 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.36■□□□□ 0.21
TIMP1P01033 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 MTHFR-217ENST00000641820 1569 ntBASIC16.35■□□□□ 0.21
TIMP1P01033 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TIMP1P01033 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 AL512430.1-201ENST00000392575 860 ntBASIC16.35■□□□□ 0.21
TIMP1P01033 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 AC234644.1-201ENST00000406065 370 ntBASIC16.35■□□□□ 0.21
TIMP1P01033 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms