Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZBED1O96006 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC134915.1-201ENST00000426461 574 ntBASIC16.32■□□□□ 0.2
ZBED1O96006 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.32■□□□□ 0.2
ZBED1O96006 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.32■□□□□ 0.2
ZBED1O96006 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.32■□□□□ 0.2
ZBED1O96006 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC005225.4-201ENST00000557330 545 ntBASIC16.32■□□□□ 0.2
ZBED1O96006 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
ZBED1O96006 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 AC025181.2-201ENST00000606994 802 ntBASIC16.32■□□□□ 0.2
ZBED1O96006 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.32■□□□□ 0.2
ZBED1O96006 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.32■□□□□ 0.2
ZBED1O96006 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZBED1O96006 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 AL109954.1-202ENST00000564051 2148 ntBASIC16.31■□□□□ 0.2
ZBED1O96006 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
ZBED1O96006 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.31■□□□□ 0.2
ZBED1O96006 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.31■□□□□ 0.2
ZBED1O96006 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.31■□□□□ 0.2
ZBED1O96006 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 AC138035.3-201ENST00000622706 2791 ntBASIC16.31■□□□□ 0.2
ZBED1O96006 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ZBED1O96006 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.31■□□□□ 0.2
ZBED1O96006 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.31■□□□□ 0.2
ZBED1O96006 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZBED1O96006 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.31■□□□□ 0.2
ZBED1O96006 AC133539.2-201ENST00000604757 467 ntBASIC16.31■□□□□ 0.2
ZBED1O96006 AC012645.4-201ENST00000610691 1061 ntBASIC16.31■□□□□ 0.2
ZBED1O96006 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZBED1O96006 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZBED1O96006 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms