Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF253O75346 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
ZNF253O75346 AGAP7P-201ENST00000582299 2062 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 AGAP14-201ENST00000624701 2060 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 AC112693.3-201ENST00000624819 1983 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF253O75346 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.11□□□□□ -0.47
ZNF253O75346 RPS8P6-201ENST00000426177 609 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF253O75346 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF253O75346 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 RARRES2P8-201ENST00000566335 367 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 RN7SL510P-201ENST00000581311 263 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF253O75346 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.11□□□□□ -0.47
ZNF253O75346 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF253O75346 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ZNF253O75346 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
ZNF253O75346 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 FGD5P1-202ENST00000614866 2498 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 REXO1L1P-202ENST00000608646 1974 ntBASIC12.1□□□□□ -0.47
ZNF253O75346 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 BNIP3P1-202ENST00000550043 1585 ntBASIC12.1□□□□□ -0.47
ZNF253O75346 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 KRT8P44-201ENST00000441609 1350 ntBASIC12.1□□□□□ -0.47
ZNF253O75346 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.1□□□□□ -0.47
ZNF253O75346 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.1□□□□□ -0.47
ZNF253O75346 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF253O75346 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 AC104692.2-201ENST00000603054 253 ntBASIC12.1□□□□□ -0.47
ZNF253O75346 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ZNF253O75346 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms