Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF40O75150 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF40O75150 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF40O75150 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF40O75150 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
RNF40O75150 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF40O75150 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
RNF40O75150 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RNF40O75150 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF40O75150 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF40O75150 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF40O75150 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF40O75150 RPL37AP1-201ENST00000412502 279 ntBASIC16.76■□□□□ 0.27
RNF40O75150 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF40O75150 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 KRT17P7-201ENST00000451704 1104 ntBASIC16.76■□□□□ 0.27
RNF40O75150 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF40O75150 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF40O75150 AL132655.2-201ENST00000596276 594 ntBASIC16.76■□□□□ 0.27
RNF40O75150 AL844908.2-201ENST00000609461 460 ntBASIC16.76■□□□□ 0.27
RNF40O75150 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.76■□□□□ 0.27
RNF40O75150 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF40O75150 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF40O75150 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF40O75150 AC015656.1-201ENST00000624209 3578 ntBASIC16.76■□□□□ 0.27
RNF40O75150 AC079781.5-202ENST00000641784 3743 ntBASIC16.75■□□□□ 0.27
RNF40O75150 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
RNF40O75150 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 OR2I1P-210ENST00000642037 4691 ntBASIC16.75■□□□□ 0.27
RNF40O75150 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF40O75150 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF40O75150 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF40O75150 RNA5SP410-201ENST00000516285 106 ntBASIC16.75■□□□□ 0.27
RNF40O75150 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.75■□□□□ 0.27
RNF40O75150 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.75■□□□□ 0.27
RNF40O75150 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.75■□□□□ 0.27
RNF40O75150 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.75■□□□□ 0.27
RNF40O75150 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF40O75150 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF40O75150 AC112693.3-201ENST00000624819 1983 ntBASIC16.75■□□□□ 0.27
RNF40O75150 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF40O75150 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF40O75150 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF40O75150 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF40O75150 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF40O75150 AC090616.6-203ENST00000579186 1945 ntBASIC16.74■□□□□ 0.27
RNF40O75150 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms