Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LCMT2O60294 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 AC007787.1-201ENST00000588095 1583 ntBASIC14.74□□□□□ -0.05
LCMT2O60294 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 AL035633.1-201ENST00000406139 838 ntBASIC14.74□□□□□ -0.05
LCMT2O60294 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.74□□□□□ -0.05
LCMT2O60294 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.74□□□□□ -0.05
LCMT2O60294 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.74□□□□□ -0.05
LCMT2O60294 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.74□□□□□ -0.05
LCMT2O60294 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.74□□□□□ -0.05
LCMT2O60294 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.74□□□□□ -0.05
LCMT2O60294 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.74□□□□□ -0.05
LCMT2O60294 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.74□□□□□ -0.05
LCMT2O60294 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LCMT2O60294 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.74□□□□□ -0.05
LCMT2O60294 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LCMT2O60294 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.73□□□□□ -0.05
LCMT2O60294 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 MROH4P-201ENST00000431302 1578 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LCMT2O60294 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.73□□□□□ -0.05
LCMT2O60294 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.73□□□□□ -0.05
LCMT2O60294 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
LCMT2O60294 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.73□□□□□ -0.05
LCMT2O60294 AC004066.1-201ENST00000502488 802 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.73□□□□□ -0.05
LCMT2O60294 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.73□□□□□ -0.05
LCMT2O60294 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.73□□□□□ -0.05
LCMT2O60294 SAMD11P1-201ENST00000571429 661 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 AP000845.1-201ENST00000581677 2131 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LCMT2O60294 AL033527.5-201ENST00000641382 801 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LCMT2O60294 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 AC007326.2-201ENST00000624224 7579 ntBASIC14.73□□□□□ -0.05
LCMT2O60294 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.73□□□□□ -0.05
LCMT2O60294 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.73□□□□□ -0.05
LCMT2O60294 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LCMT2O60294 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms