Protein–RNA interactions for Protein: O15016

TRIM66, Tripartite motif-containing protein 66, humanhuman

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM66O15016 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM66O15016 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM66O15016 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM66O15016 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM66O15016 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM66O15016 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 SSR4P1-203ENST00000599569 2260 ntBASIC16.82■□□□□ 0.28
TRIM66O15016 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM66O15016 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM66O15016 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM66O15016 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM66O15016 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM66O15016 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 AC015922.1-201ENST00000421102 1152 ntBASIC16.82■□□□□ 0.28
TRIM66O15016 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM66O15016 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 AC093004.1-201ENST00000508850 424 ntBASIC16.82■□□□□ 0.28
TRIM66O15016 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 SPDYE18-201ENST00000510091 1050 ntBASIC16.82■□□□□ 0.28
TRIM66O15016 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM66O15016 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM66O15016 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM66O15016 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM66O15016 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM66O15016 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM66O15016 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM66O15016 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM66O15016 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM66O15016 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 AC007541.1-201ENST00000570282 1469 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 AL391825.1-201ENST00000457671 1364 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM66O15016 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
TRIM66O15016 SPDYE19P-201ENST00000338590 713 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM66O15016 DFFBP1-201ENST00000433250 979 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 AL353779.1-201ENST00000434793 351 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM66O15016 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM66O15016 TIMM17BP1-201ENST00000545713 516 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM66O15016 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM66O15016 AC092337.1-201ENST00000568699 1129 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 SPDYE22P-201ENST00000582158 798 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 AC136621.1-201ENST00000624017 2304 ntBASIC16.81■□□□□ 0.28
TRIM66O15016 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM66O15016 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM66O15016 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM66O15016 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms