Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
APAF1O14727 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.24■□□□□ 0.83
APAF1O14727 CU634019.7-201ENST00000624153 1185 ntBASIC20.24■□□□□ 0.83
APAF1O14727 FP236241.2-201ENST00000624906 1185 ntBASIC20.24■□□□□ 0.83
APAF1O14727 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.24■□□□□ 0.83
APAF1O14727 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
APAF1O14727 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
APAF1O14727 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 ACE3P-201ENST00000423435 1973 ntBASIC20.24■□□□□ 0.83
APAF1O14727 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.24■□□□□ 0.83
APAF1O14727 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
APAF1O14727 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.24■□□□□ 0.83
APAF1O14727 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.24■□□□□ 0.83
APAF1O14727 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
APAF1O14727 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 AL360270.3-201ENST00000609118 1348 ntBASIC20.24■□□□□ 0.83
APAF1O14727 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
APAF1O14727 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APAF1O14727 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
APAF1O14727 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 MSTO2P-201ENST00000314835 1709 ntBASIC20.23■□□□□ 0.83
APAF1O14727 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
APAF1O14727 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.23■□□□□ 0.83
APAF1O14727 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
APAF1O14727 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
APAF1O14727 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.23■□□□□ 0.83
APAF1O14727 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.23■□□□□ 0.83
APAF1O14727 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
APAF1O14727 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
APAF1O14727 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
APAF1O14727 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APAF1O14727 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.22■□□□□ 0.83
APAF1O14727 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.22■□□□□ 0.83
APAF1O14727 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 COX20P2-201ENST00000452636 358 ntBASIC20.22■□□□□ 0.83
APAF1O14727 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.22■□□□□ 0.83
APAF1O14727 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.22■□□□□ 0.83
APAF1O14727 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.22■□□□□ 0.83
APAF1O14727 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APAF1O14727 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.22■□□□□ 0.83
APAF1O14727 BX539320.1-201ENST00000623759 877 ntBASIC20.22■□□□□ 0.83
APAF1O14727 PRSS30P-206ENST00000641773 873 ntBASIC20.22■□□□□ 0.83
APAF1O14727 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.22■□□□□ 0.83
APAF1O14727 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
APAF1O14727 AC103702.1-201ENST00000548801 2630 ntBASIC20.22■□□□□ 0.83
APAF1O14727 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms