Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.46■□□□□ 0.23
O00370 AC123567.1-201ENST00000548294 1261 ntBASIC16.46■□□□□ 0.23
O00370 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
O00370 AC138761.1-201ENST00000584393 385 ntBASIC16.46■□□□□ 0.23
O00370 BRI3BPP1-201ENST00000594224 787 ntBASIC16.46■□□□□ 0.23
O00370 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.46■□□□□ 0.23
O00370 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
O00370 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.46■□□□□ 0.23
O00370 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
O00370 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
O00370 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
O00370 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
O00370 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
O00370 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
O00370 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
O00370 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
O00370 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.45■□□□□ 0.22
O00370 CRB3P1-201ENST00000449338 276 ntBASIC16.45■□□□□ 0.22
O00370 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 MIR3197-201ENST00000582241 73 ntBASIC16.45■□□□□ 0.22
O00370 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
O00370 AL049840.4-201ENST00000602422 811 ntBASIC16.45■□□□□ 0.22
O00370 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.45■□□□□ 0.22
O00370 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.45■□□□□ 0.22
O00370 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
O00370 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
O00370 LINC00528-201ENST00000600723 2160 ntBASIC16.45■□□□□ 0.22
O00370 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.45■□□□□ 0.22
O00370 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
O00370 AC007292.2-201ENST00000593524 1812 ntBASIC16.45■□□□□ 0.22
O00370 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 AC126365.1-201ENST00000578585 1514 ntBASIC16.45■□□□□ 0.22
O00370 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
O00370 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.45■□□□□ 0.22
O00370 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
O00370 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.44■□□□□ 0.22
O00370 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
O00370 AC023024.2-201ENST00000623561 1993 ntBASIC16.44■□□□□ 0.22
O00370 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
O00370 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
O00370 NORAD-201ENST00000565493 5339 ntBASIC16.44■□□□□ 0.22
O00370 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
O00370 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 CICP11-201ENST00000434745 2827 ntBASIC16.44■□□□□ 0.22
O00370 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.44■□□□□ 0.22
O00370 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
O00370 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
O00370 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.44■□□□□ 0.22
O00370 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.44■□□□□ 0.22
O00370 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.44■□□□□ 0.22
O00370 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.44■□□□□ 0.22
O00370 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.44■□□□□ 0.22
O00370 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
O00370 SPDYE22P-201ENST00000582158 798 ntBASIC16.44■□□□□ 0.22
O00370 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
O00370 AC007431.3-201ENST00000623221 587 ntBASIC16.44■□□□□ 0.22
O00370 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.44■□□□□ 0.22
O00370 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.44■□□□□ 0.22
O00370 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
O00370 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms