Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.79□□□□□ -0.04
PDLIM1O00151 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDLIM1O00151 RPSAP43-201ENST00000402237 625 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.79□□□□□ -0.04
PDLIM1O00151 UPF3AP3-201ENST00000420996 769 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 NUTM2HP-201ENST00000442076 2498 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.79□□□□□ -0.04
PDLIM1O00151 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 AC092865.5-201ENST00000545435 363 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDLIM1O00151 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.79□□□□□ -0.04
PDLIM1O00151 AP002472.1-201ENST00000577490 586 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 AC068137.2-201ENST00000605408 478 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 PTENP1-202ENST00000532280 3996 ntBASIC14.79□□□□□ -0.04
PDLIM1O00151 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.79□□□□□ -0.04
PDLIM1O00151 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDLIM1O00151 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 OR2I1P-209ENST00000641730 5365 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDLIM1O00151 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.78□□□□□ -0.04
PDLIM1O00151 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PDLIM1O00151 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 KRT18P13-201ENST00000400056 1290 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 AC140658.5-201ENST00000438532 169 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM1O00151 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.78□□□□□ -0.04
PDLIM1O00151 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.78□□□□□ -0.04
PDLIM1O00151 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.78□□□□□ -0.04
PDLIM1O00151 MIR4321-201ENST00000592276 80 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 C20orf181-201ENST00000623918 480 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM1O00151 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 AC015909.5-201ENST00000624336 2266 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDLIM1O00151 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 AC092135.3-201ENST00000624151 1846 ntBASIC14.78□□□□□ -0.04
PDLIM1O00151 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM1O00151 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM1O00151 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM1O00151 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM1O00151 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM1O00151 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PDLIM1O00151 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM1O00151 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms