Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 PCED1CP-201ENST00000419887 785 ntBASIC10.85□□□□□ -0.67
LINC01546A6NGU7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 RHOQP3-201ENST00000437982 621 ntBASIC10.85□□□□□ -0.67
LINC01546A6NGU7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 AC105339.3-201ENST00000560043 636 ntBASIC10.85□□□□□ -0.67
LINC01546A6NGU7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 AL031008.1-201ENST00000619963 541 ntBASIC10.85□□□□□ -0.67
LINC01546A6NGU7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FAM90A12P-201ENST00000519497 2375 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FAM90A24P-201ENST00000520792 2369 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 IGLL3P-201ENST00000412472 434 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 RPS2P1-201ENST00000434010 821 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FOSL1P1-201ENST00000511041 816 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AL138918.1-201ENST00000568306 659 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AC074044.1-201ENST00000609673 707 ntBASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 IER3-202ENST00000376377 1350 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms