Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 AC148477.4-201ENST00000613430 1793 ntBASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 AC006486.2-201ENST00000624246 2199 ntBASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC112693.3-201ENST00000624819 1983 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 MIR943-201ENST00000401286 94 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TREML5P-201ENST00000421694 576 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC051619.7-201ENST00000568314 623 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms