Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AL928921.2-201ENST00000641325 2442 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 BCAR1-209ENST00000546196 1340 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 FOXO1B-201ENST00000504678 1527 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV18A0A075B6X5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV18A0A075B6X5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV18A0A075B6X5 AC113367.3-201ENST00000508316 1912 ntBASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AC084364.1-201ENST00000551967 1556 ntBASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AL607033.1-201ENST00000623900 1599 ntBASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AC098831.1-202ENST00000438821 336 ntBASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AL139010.1-201ENST00000454878 894 ntBASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 AC018529.2-202ENST00000611482 3087 ntBASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV18A0A075B6X5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 AC004877.2-201ENST00000623941 599 ntBASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms