Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 AC148477.4-201ENST00000613430 1793 ntBASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 AC092337.1-201ENST00000568699 1129 ntBASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 TMEM261P1-201ENST00000604899 340 ntBASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 AC010319.3-201ENST00000597028 470 ntBASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDHB1Q9Y5F3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 AL121723.1-201ENST00000445194 1519 ntBASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 AC104989.1-201ENST00000519711 778 ntBASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 RRP7BP-205ENST00000566851 833 ntBASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 MIR4538-201ENST00000581377 78 ntBASIC15.43■□□□□ 0.06
PCDHB1Q9Y5F3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms