Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 KRT8P37-201ENST00000451609 1420 ntBASIC14.66□□□□□ -0.06
AP4S1Q9Y587 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
AP4S1Q9Y587 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC018442.1-201ENST00000421439 2061 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC084364.1-201ENST00000551967 1556 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 PRSS29P-201ENST00000440800 595 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC098859.1-201ENST00000502915 1238 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC097359.3-201ENST00000603982 1210 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 REXO1L6P-202ENST00000619970 1078 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC008735.5-201ENST00000623544 497 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC011474.4-201ENST00000623523 2076 ntBASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
AP4S1Q9Y587 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
AP4S1Q9Y587 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
AP4S1Q9Y587 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AC089987.1-201ENST00000551654 2209 ntBASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms