Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GNRHR2-203ENST00000581100 1187 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 BNIP3P29-201ENST00000598302 571 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AC145423.3-201ENST00000615987 467 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AC011447.5-201ENST00000616168 564 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 HLA-V-201ENST00000429037 534 ntBASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 KRT90P-201ENST00000549264 1064 ntBASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AC025279.2-201ENST00000569730 653 ntBASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 AC007787.1-201ENST00000588095 1583 ntBASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 HYMAI-201ENST00000635591 3347 ntBASIC10.55□□□□□ -0.72
LINC00588Q9Y4M8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms