Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 PRSS30P-206ENST00000641773 873 ntBASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 AC006058.4-201ENST00000624016 1670 ntBASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PCDHA4Q9UN74 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 REXO1L2P-201ENST00000425429 2069 ntBASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 NUS1P3-201ENST00000423502 862 ntBASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 COX20P2-201ENST00000452636 358 ntBASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 RPSAP52-203ENST00000622976 1023 ntBASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHA4Q9UN74 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 DBET-201ENST00000630918 3363 ntBASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 RN7SL752P-201ENST00000463779 287 ntBASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LINC02084-201ENST00000606069 1096 ntBASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHA4Q9UN74 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms