Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 RN7SKP175-201ENST00000408472 289 ntBASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 HLA-V-201ENST00000429037 534 ntBASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AC026954.1-201ENST00000429771 1293 ntBASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AL391280.1-201ENST00000506969 1062 ntBASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 AC017083.2-201ENST00000608069 979 ntBASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPC1L1Q9UHC9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 ATP5G2P4-201ENST00000442175 420 ntBASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC131206.1-201ENST00000538078 1211 ntBASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 DUX4L45-201ENST00000566406 1057 ntBASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 AC073413.1-201ENST00000603927 732 ntBASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPC1L1Q9UHC9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.45■□□□□ 0.87
NPC1L1Q9UHC9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 TPM3P8-201ENST00000330554 643 ntBASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.45■□□□□ 0.86
NPC1L1Q9UHC9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms