Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AL121723.1-201ENST00000445194 1519 ntBASIC15.75■□□□□ 0.11
EBF1Q9UH73 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AC004945.1-201ENST00000416738 983 ntBASIC15.75■□□□□ 0.11
EBF1Q9UH73 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 DRD5P1-201ENST00000456605 1438 ntBASIC15.75■□□□□ 0.11
EBF1Q9UH73 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.75■□□□□ 0.11
EBF1Q9UH73 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EBF1Q9UH73 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.74■□□□□ 0.11
EBF1Q9UH73 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AC006001.1-201ENST00000325130 474 ntBASIC15.74■□□□□ 0.11
EBF1Q9UH73 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 FAM86HP-204ENST00000513466 959 ntBASIC15.74■□□□□ 0.11
EBF1Q9UH73 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AC025279.2-201ENST00000569730 653 ntBASIC15.74■□□□□ 0.11
EBF1Q9UH73 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.74■□□□□ 0.11
EBF1Q9UH73 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EBF1Q9UH73 AL009178.2-201ENST00000597278 2719 ntBASIC15.74■□□□□ 0.11
EBF1Q9UH73 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms