Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 AC092933.1-201ENST00000393644 945 ntBASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 ACTBP11-201ENST00000436287 1126 ntBASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 RPL7P3-201ENST00000441388 714 ntBASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 CSF2RBP1-201ENST00000447905 391 ntBASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 AC018892.3-201ENST00000623986 2499 ntBASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 AL121723.1-201ENST00000445194 1519 ntBASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC6Q9UBN7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AC006058.4-201ENST00000624016 1670 ntBASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 MIR1908-201ENST00000410394 80 ntBASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 BAATP1-201ENST00000412284 1225 ntBASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AL355864.2-201ENST00000447420 863 ntBASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AC005252.2-201ENST00000624630 1141 ntBASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 AC023157.3-201ENST00000619086 2088 ntBASIC17.46■□□□□ 0.39
HDAC6Q9UBN7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.46■□□□□ 0.38
HDAC6Q9UBN7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms