Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 AL033527.5-202ENST00000641632 1098 ntBASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
LINC00474Q9P2X8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 BTBD7P1-201ENST00000447253 1453 ntBASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC087499.5-201ENST00000452760 1342 ntBASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC241585.1-201ENST00000433527 519 ntBASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AL133215.2-201ENST00000609242 977 ntBASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms