Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KRT18P25-201ENST00000508931 1278 ntBASIC14.19□□□□□ -0.14
LRFN1Q9P244 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 AL354718.3-201ENST00000616414 581 ntBASIC14.19□□□□□ -0.14
LRFN1Q9P244 CR382287.1-201ENST00000623954 586 ntBASIC14.19□□□□□ -0.14
LRFN1Q9P244 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 AL513523.2-202ENST00000427283 2040 ntBASIC14.19□□□□□ -0.14
LRFN1Q9P244 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.18□□□□□ -0.14
LRFN1Q9P244 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 RPL7P3-201ENST00000441388 714 ntBASIC14.18□□□□□ -0.14
LRFN1Q9P244 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 MIR6799-201ENST00000620297 69 ntBASIC14.18□□□□□ -0.14
LRFN1Q9P244 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.18□□□□□ -0.14
LRFN1Q9P244 AC127383.1-201ENST00000444697 1800 ntBASIC14.18□□□□□ -0.14
LRFN1Q9P244 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRFN1Q9P244 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.17□□□□□ -0.14
LRFN1Q9P244 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LRFN1Q9P244 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.17□□□□□ -0.14
LRFN1Q9P244 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.17□□□□□ -0.14
LRFN1Q9P244 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.17□□□□□ -0.14
LRFN1Q9P244 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.17□□□□□ -0.14
LRFN1Q9P244 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRFN1Q9P244 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms