Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CNTN3Q9P232 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNTN3Q9P232 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNTN3Q9P232 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.53■□□□□ 0.24
CNTN3Q9P232 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNTN3Q9P232 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 AC112693.3-201ENST00000624819 1983 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 HLA-K-203ENST00000430151 1046 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 FAM197Y7-201ENST00000432892 766 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 BNIP3P42-201ENST00000454982 569 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 BNIP3P29-201ENST00000598302 571 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 AC011447.5-201ENST00000616168 564 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNTN3Q9P232 TMBIM7P-203ENST00000641617 1718 ntBASIC16.52■□□□□ 0.24
CNTN3Q9P232 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNTN3Q9P232 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNTN3Q9P232 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CNTN3Q9P232 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 LRRC59-203ENST00000576448 1531 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 SSR4P1-203ENST00000599569 2260 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 HLA-V-201ENST00000429037 534 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 EIF3FP3-201ENST00000434851 1086 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 CSF2RBP1-201ENST00000447905 391 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 AC079316.1-201ENST00000548397 411 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 RN7SL48P-201ENST00000579283 293 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 AC073347.1-201ENST00000421633 2643 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 AC136621.1-201ENST00000624017 2304 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTN3Q9P232 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.51■□□□□ 0.23
CNTN3Q9P232 DBET-201ENST00000630918 3363 ntBASIC16.51■□□□□ 0.23
CNTN3Q9P232 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms