Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC067863.1-201ENST00000494933 530 ntBASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC069262.1-201ENST00000539058 672 ntBASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC015911.4-201ENST00000588022 1070 ntBASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AL136982.4-201ENST00000437689 1740 ntBASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AL139400.1-201ENST00000366220 510 ntBASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AC109322.1-201ENST00000524499 1264 ntBASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 WASH3P-207ENST00000560956 1394 ntBASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 FO538757.1-201ENST00000623083 1397 ntBASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.9□□□□□ -0.34
LIN7CQ9NUP9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LIN7CQ9NUP9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms