Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCM2LQ9NUG4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 AC004987.2-201ENST00000395959 1148 ntBASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 TERF1P3-201ENST00000505638 1227 ntBASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.77□□□□□ -0.05
CCM2LQ9NUG4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 FLJ16779-201ENST00000612722 7638 ntBASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AC236430.1-201ENST00000402231 743 ntBASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AL450472.2-201ENST00000603663 1156 ntBASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 AL928921.2-201ENST00000641325 2442 ntBASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCM2LQ9NUG4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms