Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC027307.3-201ENST00000594262 1100 ntBASIC16.42■□□□□ 0.22
CISHQ9NSE2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AL033527.5-201ENST00000641382 801 ntBASIC16.41■□□□□ 0.22
CISHQ9NSE2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.41■□□□□ 0.22
CISHQ9NSE2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AL158070.2-201ENST00000623713 1621 ntBASIC16.41■□□□□ 0.22
CISHQ9NSE2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CISHQ9NSE2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.4■□□□□ 0.22
CISHQ9NSE2 AP005018.1-201ENST00000525475 301 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 AP001582.1-201ENST00000525856 295 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 ENPP7P5-201ENST00000541031 1031 ntBASIC16.4■□□□□ 0.22
CISHQ9NSE2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CISHQ9NSE2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms