Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AC087499.6-201ENST00000411576 835 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 DFFBP1-201ENST00000433250 979 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 SPTLC1P1-201ENST00000447199 261 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AC104596.2-201ENST00000512793 793 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 RARRES2P5-201ENST00000564013 466 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AL158212.4-201ENST00000624062 1286 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 AC144831.1-201ENST00000573312 2656 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC007541.1-201ENST00000570282 1469 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC023310.3-201ENST00000557027 670 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC100756.1-201ENST00000562736 682 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC138749.3-201ENST00000567691 622 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC116165.1-201ENST00000611806 668 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC105250.1-201ENST00000509378 2057 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH20Q9HBT6 AC020658.6-201ENST00000623564 1870 ntBASIC13.55□□□□□ -0.24
CDH20Q9HBT6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 FAM45BP-202ENST00000592932 1624 ntBASIC13.54□□□□□ -0.24
CDH20Q9HBT6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDH20Q9HBT6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms