Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.03■□□□□ 0.64
UPF2Q9HAU5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPF2Q9HAU5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 FAAHP1-202ENST00000446499 1238 ntBASIC19.02■□□□□ 0.64
UPF2Q9HAU5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 AL135744.1-201ENST00000565098 629 ntBASIC19.02■□□□□ 0.64
UPF2Q9HAU5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UPF2Q9HAU5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.02■□□□□ 0.63
UPF2Q9HAU5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UPF2Q9HAU5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
UPF2Q9HAU5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPF2Q9HAU5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPF2Q9HAU5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPF2Q9HAU5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 AL691432.3-201ENST00000621860 400 ntBASIC19.01■□□□□ 0.63
UPF2Q9HAU5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPF2Q9HAU5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19■□□□□ 0.63
UPF2Q9HAU5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19■□□□□ 0.63
UPF2Q9HAU5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19■□□□□ 0.63
UPF2Q9HAU5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19■□□□□ 0.63
UPF2Q9HAU5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPF2Q9HAU5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19■□□□□ 0.63
UPF2Q9HAU5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19■□□□□ 0.63
UPF2Q9HAU5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms