Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AC091951.1-201ENST00000512854 2465 ntBASIC14.27□□□□□ -0.13
TRIM2Q9C040 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM2Q9C040 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
TRIM2Q9C040 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 AC015922.1-201ENST00000421102 1152 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 TEX28P1-201ENST00000613479 1221 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 AL138828.2-201ENST00000615812 383 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 TEX28P2-201ENST00000617764 1221 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 SPDYE12P-201ENST00000618416 771 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 AC073592.8-201ENST00000624126 511 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 AC099063.4-201ENST00000641099 1602 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 MROH4P-201ENST00000431302 1578 ntBASIC14.26□□□□□ -0.13
TRIM2Q9C040 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM2Q9C040 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM2Q9C040 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 INGX-202ENST00000489074 768 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 SDHAP3-202ENST00000515467 728 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 AC069120.2-201ENST00000524091 540 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 MIR4745-201ENST00000577608 62 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 AL158211.3-201ENST00000607385 239 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 AC074044.1-201ENST00000609673 707 ntBASIC14.25□□□□□ -0.13
TRIM2Q9C040 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM2Q9C040 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM2Q9C040 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms