Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TREX2Q9BQ50 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AC084364.1-201ENST00000551967 1556 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 RPL5P21-201ENST00000404620 815 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 TARDBPP1-201ENST00000442013 1203 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ATP5G2P4-201ENST00000442175 420 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 TP53TG3HP-202ENST00000569755 579 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AC004233.3-201ENST00000607794 1269 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 AL138828.2-201ENST00000615812 383 ntBASIC14.56□□□□□ -0.08
TREX2Q9BQ50 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TREX2Q9BQ50 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 LINC01101-201ENST00000622953 1884 ntBASIC14.55□□□□□ -0.08
TREX2Q9BQ50 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 C8orf49-201ENST00000525043 1968 ntBASIC14.55□□□□□ -0.08
TREX2Q9BQ50 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.55□□□□□ -0.08
TREX2Q9BQ50 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms